F6I0G5_VITVI protein (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F6I0G5_VITVI

Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (636 aa)

Predicted Functional Partners:

F6HLJ1_VITVI

0.713

F6I0I4_VITVI

0.704

D7SKZ8_VITVI

0.672

F6H4H2_VITVI

0.659

F6H4J7_VITVI

0.625

D7U4C0_VITVI

0.513

F6I488_VITVI

0.511

D7U1D5_VITVI

0.503

F6HC50_VITVI

0.503

F6HZP8_VITVI

0.494

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SKZ8_VITVI	F6I0G5_VITVI	D7SKZ8	F6I0G5	TPT domain-containing protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.672
D7U1D5_VITVI	F6HZP8_VITVI	D7U1D5	F6HZP8	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.	0.938
D7U1D5_VITVI	F6I0G5_VITVI	D7U1D5	F6I0G5	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.503
D7U4C0_VITVI	F6H4H2_VITVI	D7U4C0	F6H4H2	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	Polysacc_synt_4 domain-containing protein.	0.472
D7U4C0_VITVI	F6H4J7_VITVI	D7U4C0	F6H4J7	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	DNA polymerase.	0.828
D7U4C0_VITVI	F6HC50_VITVI	D7U4C0	F6HC50	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	Uncharacterized protein.	0.758
D7U4C0_VITVI	F6HLJ1_VITVI	D7U4C0	F6HLJ1	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	Uncharacterized protein.	0.658
D7U4C0_VITVI	F6I0G5_VITVI	D7U4C0	F6I0G5	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.513
D7U4C0_VITVI	F6I0I4_VITVI	D7U4C0	F6I0I4	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	Protein kinase domain-containing protein.	0.661
D7U4C0_VITVI	F6I488_VITVI	D7U4C0	F6I488	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.903
F6H4H2_VITVI	D7U4C0_VITVI	F6H4H2	D7U4C0	Polysacc_synt_4 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.472
F6H4H2_VITVI	F6H4J7_VITVI	F6H4H2	F6H4J7	Polysacc_synt_4 domain-containing protein.	DNA polymerase.	0.428
F6H4H2_VITVI	F6HC50_VITVI	F6H4H2	F6HC50	Polysacc_synt_4 domain-containing protein.	Uncharacterized protein.	0.472
F6H4H2_VITVI	F6I0G5_VITVI	F6H4H2	F6I0G5	Polysacc_synt_4 domain-containing protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.659
F6H4H2_VITVI	F6I488_VITVI	F6H4H2	F6I488	Polysacc_synt_4 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.472
F6H4J7_VITVI	D7U4C0_VITVI	F6H4J7	D7U4C0	DNA polymerase.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.828
F6H4J7_VITVI	F6H4H2_VITVI	F6H4J7	F6H4H2	DNA polymerase.	Polysacc_synt_4 domain-containing protein.	0.428
F6H4J7_VITVI	F6HC50_VITVI	F6H4J7	F6HC50	DNA polymerase.	Uncharacterized protein.	0.901
F6H4J7_VITVI	F6HLJ1_VITVI	F6H4J7	F6HLJ1	DNA polymerase.	Uncharacterized protein.	0.989
F6H4J7_VITVI	F6I0G5_VITVI	F6H4J7	F6I0G5	DNA polymerase.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.625