STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I185_VITVIUncharacterized protein. (88 aa)    
Predicted Functional Partners:
D7TB62_VITVI
Uncharacterized protein.
   
   0.665
D7U601_VITVI
Uncharacterized protein.
   
   0.660
F6H4D1_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
   0.659
F6GZT2_VITVI
Uncharacterized protein.
   
   0.651
D7TM44_VITVI
Ribosomal_L18e/L15P domain-containing protein.
   
   0.646
D7U8M4_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
   0.646
F6HAI2_VITVI
Uncharacterized protein.
   
   0.644
D7SPD6_VITVI
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
   
   0.643
D7T692_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.643
D7TR92_VITVI
Uncharacterized protein.
   
   0.643
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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