STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I1H4_VITVILongin domain-containing protein; Belongs to the synaptobrevin family. (95 aa)    
Predicted Functional Partners:
D7TM58_VITVI
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.669
E0CU27_VITVI
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.612
VITISV_032084
t-SNARE coiled-coil homology domain-containing protein.
    
 0.587
D7SI51_VITVI
Uncharacterized protein.
    
 0.587
F6GT32_VITVI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.587
F6I3K6_VITVI
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.491
D7SJL9_VITVI
Uncharacterized protein.
     
 0.488
D7T6E9_VITVI
Uncharacterized protein; Belongs to the synaptobrevin family.
  
     0.479
F6HG41_VITVI
YqaJ domain-containing protein.
   
 0.475
VITISV_018887
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.472
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.