STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I4B2_VITVIGlyco_hydro_19_cat domain-containing protein. (316 aa)    
Predicted Functional Partners:
D7SV80_VITVI
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.628
F6H3L5_VITVI
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.628
D7TJU3_VITVI
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.619
D7U9W0_VITVI
Uncharacterized protein; Belongs to the rad9 family.
      
 0.619
F6H139_VITVI
NAB domain-containing protein.
      
 0.619
F6H1N2_VITVI
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.619
F6H943_VITVI
Protein kinase domain-containing protein.
      
 0.619
F6HE06_VITVI
Uncharacterized protein.
      
 0.619
F6I0J7_VITVI
Uncharacterized protein.
      
 0.619
F6H750_VITVI
Uncharacterized protein.
      
 0.617
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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