STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I6C2_VITVISde2_N_Ubi domain-containing protein. (441 aa)    
Predicted Functional Partners:
F6H8I7_VITVI
Slu7 domain-containing protein.
   
 0.970
F6HRP6_VITVI
Uncharacterized protein.
   
 0.970
F6HRP7_VITVI
Uncharacterized protein.
   
 0.970
F6GTR9_VITVI
Uncharacterized protein.
   
 0.964
D7SS04_VITVI
Uncharacterized protein.
   
 0.954
F6I5Y2_VITVI
Uncharacterized protein.
    
 0.951
F6I0Z7_VITVI
Uncharacterized protein.
   
  0.950
D7TDY1_VITVI
Nkap_C domain-containing protein.
   
 0.936
D7UAL8_VITVI
Uncharacterized protein.
    
 
 0.916
D7SZN5_VITVI
Uncharacterized protein.
   
 
 0.905
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.