STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I7D8_VITVIUncharacterized protein. (2168 aa)    
Predicted Functional Partners:
D7TPK3_VITVI
Uncharacterized protein.
  
  
 0.517
F6HLC4_VITVI
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
  
  
 0.491
F6HBI7_VITVI
Uncharacterized protein.
  
 
 0.478
F6HXQ9_VITVI
Uncharacterized protein.
  
     0.470
F6HN82_VITVI
Uncharacterized protein.
  
     0.462
F6HVC7_VITVI
Uncharacterized protein.
  
     0.443
D7U3I2_VITVI
Uncharacterized protein.
  
     0.441
D7TW52_VITVI
Uncharacterized protein.
  
     0.438
F6GY69_VITVI
Importin N-terminal domain-containing protein.
  
     0.428
F6H734_VITVI
Uncharacterized protein.
  
    0.426
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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