STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps1530S ribosomal protein S15, chloroplastic; Belongs to the universal ribosomal protein uS15 family. (88 aa)    
Predicted Functional Partners:
F6HCK0_VITVI
Uncharacterized protein.
   
 0.978
rps16
30S ribosomal protein S16, chloroplastic.
  
 0.974
rps2
30S ribosomal protein S2, chloroplastic.
  
 0.970
F6H502_VITVI
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.967
rps12-A
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
  
 0.963
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 0.957
rps11-2
30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.
  
 0.957
D7SJ33_VITVI
MRP-S28 domain-containing protein.
   
 0.950
VITISV_019246
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.949
D7TB62_VITVI
Uncharacterized protein.
  
 0.949
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.