STRINGSTRING
VIT_00s0259g00140.t01 protein (Vitis vinifera) - STRING interaction network
"VIT_00s0259g00140.t01" - Uncharacterized protein in Vitis vinifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIT_00s0259g00140.t01Uncharacterized protein (217 aa)    
Predicted Functional Partners:
VIT_17s0000g06000.t01
Uncharacterized protein (256 aa)
     
   
  0.743
VIT_16s0098g01250.t01
Uncharacterized protein (665 aa)
     
   
  0.725
VIT_02s0025g02510.t01
Uncharacterized protein (549 aa)
           
  0.667
VVYS1
Uncharacterized protein (661 aa)
           
  0.667
VIT_14s0108g00480.t01
Uncharacterized protein (328 aa)
     
   
  0.651
VIT_07s0129g00470.t01
Uncharacterized protein (309 aa)
     
   
  0.623
VIT_16s0098g00330.t01
Uncharacterized protein (670 aa)
     
   
  0.603
VIT_00s0508g00040.t01
Uncharacterized protein (404 aa)
           
  0.594
VIT_01s0026g01490.t01
Uncharacterized protein (619 aa)
     
 
  0.588
VIT_13s0064g00940.t01
Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (547 aa)
           
  0.578
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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