STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g2678General negative regulator of transcription subunit 2. (209 aa)    
Predicted Functional Partners:
AWRI3580_g686
General negative regulator of transcription subunit 1.
   
 0.997
AWRI3580_g1333
General negative regulator of transcription subunit 5.
    
 0.996
AWRI3580_g2858
General negative regulator of transcription subunit 4.
    
 0.990
AWRI3580_g3908
Protein CAF40.
    
 0.989
AWRI3580_g692
Poly(A) ribonuclease POP2.
   
 0.981
AWRI3580_g1982
Glucose-repressible alcohol dehydrogenase transcriptional effector.
    
 0.965
AWRI3580_g1044
Exosome complex component SKI6.
    
 
 0.904
AWRI3580_g2900
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.897
AWRI3580_g2047
ATP-dependent RNA helicase DOB1.
    
 
 0.897
AWRI3580_g3813
Exosome complex component RRP42.
    
   0.896
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.