STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g824Uncharacterized protein JIP4. (855 aa)    
Predicted Functional Partners:
AWRI3580_g4021
Superkiller protein 3.
    
 0.734
AWRI3580_g285
Antiviral helicase SKI2.
    
 0.714
AWRI3580_g3939
RNA polymerase-associated protein CTR9.
    
 0.671
AWRI3580_g257
Cell division control protein 73.
    
 0.670
AWRI3580_g1508
RNA polymerase-associated protein LEO1.
    
 0.666
AWRI3580_g2515
Cytochrome c iso-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.647
AWRI3580_g2638
RNA polymerase II-associated protein 1.
    
 0.644
AWRI3580_g2047
ATP-dependent RNA helicase DOB1.
    
 0.603
AWRI3580_g1676
Uncharacterized protein.
   
  0.602
AWRI3580_g1344
Importin beta SMX1.
    
 0.594
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.