STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g344DNA-(Apurinic or apyrimidinic site) lyase 1. (356 aa)    
Predicted Functional Partners:
AWRI3580_g3760
DNA-(Apurinic or apyrimidinic site) lyase 2.
    
 0.953
AWRI3580_g3104
Diacylglycerol O-acyltransferase 1.
 
      0.839
AWRI3580_g3942
Endonuclease III.
  
 
 0.755
UNG1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
   
 
 0.700
AWRI3580_g2261
N-glycosylase/DNA lyase.
   
 
 0.658
AWRI3580_g1254
DNA repair protein RAD1.
   
 
 0.632
AWRI3580_g2347
DNA repair protein RAD14.
   
 
 0.597
AWRI3580_g3124
DNA polymerase.
    
 
 0.589
AWRI3580_g2394
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
 
 0.514
AWRI3580_g447
Uncharacterized protein.
   
 
 0.510
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.