STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g60Pre-rRNA-processing protein TSR2. (204 aa)    
Predicted Functional Partners:
AWRI3580_g1319
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.917
AWRI3580_g2853
U3 small nucleolar ribonucleoprotein LCP5.
   
    0.759
AWRI3580_g3323
DNA-directed RNA polymerase I subunit RPA43.
   
    0.756
AWRI3580_g1647
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.738
AWRI3580_g1456
Ribosome biogenesis protein RPF2.
   
  
 0.736
AWRI3580_g946
Ribosome biogenesis protein RLP24.
   
    0.725
AWRI3580_g3553
Ribosome biogenesis protein BRX1.
   
   0.718
AWRI3580_g2048
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.718
AWRI3580_g1712
Ribosome biogenesis protein 15.
   
    0.700
AWRI3580_g1274
Nucleolar complex protein 2.
   
    0.698
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.