STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4793Putative fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (720 aa)    
Predicted Functional Partners:
FADA
Putative Acetyl-CoA acetyltransferase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
 0.999
SF2420
Putative fatty oxidation complex, beta subunit; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
 0.999
PA3925
Putative acyl-CoA thiolase; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SPYM3_13
Putative acetyl-CoA acetyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
S0292
Putative oxidoreductase, acyl-CoA dehydrogenase family; Predicted by orpheus program; predicted by glimmer program.
 
 0.996
PP4064
Putative acyl-CoA dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
 0.995
PP1893
Putative oxidoreductase, acyl-CoA dehydrogenase family; Predicted by orpheus program; predicted by glimmer program.
 
 0.978
CAIA
Putative acyl-CoA dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
 0.977
MLR6539
Putative acetyl-CoA synthase; Predicted by orpheus program; predicted by glimmer program.
  
 0.976
RS03236
Putative propionyl-CoA carboxylase(beta subunit) protein; Predicted by orpheus program; predicted by glimmer program.
  
 0.970
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (22%) [HD]