Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APBA | XAC3574 | PBPRA0812 | PBPRA1248 | Hypothetical 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | 0.838 |
CBU0772 | XAC3574 | PBPRA1247 | PBPRA1248 | Putative methylcitrate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the citrate synthase family. | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | 0.642 |
DAT | SCO6461 | PBPRB0210 | PBPRB0209 | Hypothetical methylated DNA-protein cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Hypothetical ada regulatory protein; Predicted by orpheus program; predicted by glimmer program. | 0.948 |
DAT | XAC3574 | PBPRB0210 | PBPRA1248 | Hypothetical methylated DNA-protein cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | 0.428 |
SCO6461 | DAT | PBPRB0209 | PBPRB0210 | Hypothetical ada regulatory protein; Predicted by orpheus program; predicted by glimmer program. | Hypothetical methylated DNA-protein cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.948 |
SCO6461 | XAC3574 | PBPRB0209 | PBPRA1248 | Hypothetical ada regulatory protein; Predicted by orpheus program; predicted by glimmer program. | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | 0.475 |
XAC3574 | APBA | PBPRA1248 | PBPRA0812 | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | Hypothetical 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.838 |
XAC3574 | CBU0772 | PBPRA1248 | PBPRA1247 | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | Putative methylcitrate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the citrate synthase family. | 0.642 |
XAC3574 | DAT | PBPRA1248 | PBPRB0210 | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | Hypothetical methylated DNA-protein cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.428 |
XAC3574 | SCO6461 | PBPRA1248 | PBPRB0209 | Putative alkylated DNA repair protein; Predicted by orpheus program; predicted by glimmer program. | Hypothetical ada regulatory protein; Predicted by orpheus program; predicted by glimmer program. | 0.475 |