STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SF2367Putative hydrolase of HD superfamily; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates. (194 aa)    
Predicted Functional Partners:
surE
Putative acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.921
YJJG
Putative haloacid dehalogenase-like hydrolase family protein; Predicted by orpheus program; predicted by glimmer program.
     
 0.920
STM2183
Putative cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.
  
  
 0.912
ECS0533
Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
     
 0.908
SO3317
Hypothetical 5`-nucleotidase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
     
 0.908
PBPRB1892
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
     
 0.908
C5468
Putative purine nucleoside phosphorylase; Predicted by orpheus program; predicted by glimmer program.
     
 0.903
MSSA
Putative cytidylate kinase; Predicted by orpheus program; predicted by glimmer program.
     
 0.903
DEOD
Putative purine nucleoside phosphorylase; Predicted by orpheus program; predicted by glimmer program.
     
 0.903
HD1933
Putative thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
  0.902
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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