STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPO2908Putative Flavodoxin reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. (394 aa)    
Predicted Functional Partners:
STY4724
Conserved hypothetical protein; Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity.
 
   
 0.955
hcp
Putative prismane protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.893
ATU4383
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.882
STM1271
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.843
STM4056
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
   
 0.797
NE1420
Hypothetical oxidoreductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the FAD-dependent oxidoreductase family.
  
  
 0.660
C4141
Putative nitrite reductase (NAD(P)H), large subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.660
Y3945
Putative NAD(P)H-nitrite reductase, large subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.660
VVA0181
Putative flavoprotein; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.607
ATU2380
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.593
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.