Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABW10130.1 | ABW10131.1 | Franean1_0671 | Franean1_0672 | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: fal:FRAAL6409 hypothetical protein; putative MarR-family transcriptional regulator. | 0.570 |
ABW10130.1 | ABW11456.1 | Franean1_0671 | Franean1_2019 | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | PFAM: Rhodanese domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: fal:FRAAL3862 thiosulfate sulfurtransferase (partial match). | 0.537 |
ABW10130.1 | ABW11654.1 | Franean1_0671 | Franean1_2219 | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.537 |
ABW10130.1 | ABW15756.1 | Franean1_0671 | Franean1_6419 | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.422 |
ABW10130.1 | ABW15757.1 | Franean1_0671 | Franean1_6420 | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: sco:SCO6461 putative ADA-like regulatory protein. | 0.724 |
ABW10131.1 | ABW10130.1 | Franean1_0672 | Franean1_0671 | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: fal:FRAAL6409 hypothetical protein; putative MarR-family transcriptional regulator. | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | 0.570 |
ABW11456.1 | ABW10130.1 | Franean1_2019 | Franean1_0671 | PFAM: Rhodanese domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: fal:FRAAL3862 thiosulfate sulfurtransferase (partial match). | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | 0.537 |
ABW11654.1 | ABW10130.1 | Franean1_2219 | Franean1_0671 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | 0.537 |
ABW15756.1 | ABW10130.1 | Franean1_6419 | Franean1_0671 | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | 0.422 |
ABW15756.1 | ABW15757.1 | Franean1_6419 | Franean1_6420 | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: sco:SCO6461 putative ADA-like regulatory protein. | 0.970 |
ABW15757.1 | ABW10130.1 | Franean1_6420 | Franean1_0671 | PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: sco:SCO6461 putative ADA-like regulatory protein. | KEGG: fal:FRAAL6410 putative alkylated DNA repair protein. | 0.724 |
ABW15757.1 | ABW15756.1 | Franean1_6420 | Franean1_6419 | PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: sco:SCO6461 putative ADA-like regulatory protein. | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.970 |