STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (743 aa)    
Predicted Functional Partners:
ABW16125.1
PFAM: Catalase domain protein; KEGG: fal:FRAAL3167 catalase.
    
 0.946
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: fal:FRAAL5003 histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.909
ABW10972.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sen:SACE_4667 ferric uptake regulation protein; Belongs to the Fur family.
     
 0.908
ABW15408.1
Aminotransferase class I and II; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: fal:FRAAL1062 aspartate aminotransferase (transaminase A) (ASPAT).
     
 0.905
ABW14799.1
Tyrosine 3-monooxygenase; PFAM: aromatic amino acid hydroxylase; KEGG: nfa:nfa9410 putative phenylalanine hydroxylase.
     
  0.900
ABW12899.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.872
ABW13446.1
Superoxide dismutase copper/zinc binding; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
     
 0.860
ABW11033.1
PFAM: prephenate dehydratase; KEGG: fal:FRAAL3225 prephenate dehydratase (PDT).
     
  0.800
ABW11425.1
PFAM: prephenate dehydratase; KEGG: fal:FRAAL4901 prephenate dehydratase.
     
  0.800
ABW14520.1
PFAM: isochorismatase hydrolase; KEGG: fal:FRAAL2123 pyrazinamidase/nicotinamidase.
      
 0.748
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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