STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW11594.1PFAM: Heparinase II/III family protein; KEGG: fal:FRAAL2048 hypothetical protein. (587 aa)    
Predicted Functional Partners:
ABW11596.1
PFAM: glycosyl transferase group 1; KEGG: fal:FRAAL2052 putative glycosyl transferase.
 
     0.909
ABW11598.1
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; KEGG: fal:FRAAL2055 putative zinc-binding dehydrogenase.
 
     0.818
ABW11592.1
KEGG: sfu:Sfum_3332 coenzyme F390 synthetase-like.
 
     0.812
ABW11593.1
KEGG: aba:Acid345_3796 hypothetical protein.
 
     0.809
ABW11591.1
PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_2639 glycosyl transferase, group 1.
       0.780
ABW11595.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: fal:FRAAL2051 hypothetical protein; putative SAM domain.
       0.780
ABW11590.1
PFAM: Methyltransferase type 12; KEGG: cte:CT1909 hypothetical protein.
       0.660
ABW11597.1
PFAM: glycosyl transferase family 4; KEGG: fal:FRAAL2054 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase.
 
     0.564
ABW11599.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: fal:FRAAL2057 UDP-N-acetyl glucosamine-2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
     0.559
ABW16556.1
KEGG: fal:FRAAL0096 hypothetical protein; putative IMP dehydrogenase / GMP reductase domain.
  
     0.403
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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