STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW13446.1Superoxide dismutase copper/zinc binding; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (214 aa)    
Predicted Functional Partners:
ABW11250.1
PFAM: Cytochrome b/b6 domain; KEGG: fal:FRAAL5109 ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 
 0.965
ABW12899.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.964
ABW11249.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: fal:FRAAL5110 ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein).
    
 
 0.960
ABW15093.1
PFAM: Heavy metal transport/detoxification protein; KEGG: dre:564924 ATPase, Cu++ transporting, alpha polypeptide (Menkes syndrome).
  
 0.921
ABW15095.1
PFAM: Heavy metal transport/detoxification protein; KEGG: cmi:CMM_1036 putative copper binding protein.
  
 0.921
ABW15471.1
PFAM: Heavy metal transport/detoxification protein; KEGG: sco:SCO2730 regulator.
  
 0.921
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.860
ABW11239.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 
 0.845
ABW11247.1
PFAM: cytochrome c oxidase subunit III; KEGG: fal:FRAAL5112 cytochrome c oxidase polypeptide III (cytochrome AA3 subunit 3).
    
 
 0.844
ABW11241.1
Putative integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.837
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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