STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW14110.1Pyruvate carboxyltransferase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (336 aa)    
Predicted Functional Partners:
ABW14111.1
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
 0.999
ABW12304.1
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
 0.998
ABW14112.1
PFAM: Hydratase/decarboxylase; KEGG: nfa:nfa33180 putative hydratase.
 
 
 0.996
ABW12305.1
PFAM: Hydratase/decarboxylase; KEGG: stp:Strop_3527 4-oxalocrotonate decarboxylase.
 
 
 0.984
ABW12310.1
PFAM: Hydratase/decarboxylase; KEGG: mva:Mvan_0595 4-oxalocrotonate decarboxylase.
 
 
 0.983
ABW12303.1
Pyruvate carboxyltransferase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
  
  
 
0.901
mhpB-2
Extradiol ring-cleavage dioxygenase class III protein subunit B; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family.
 
  
 0.739
ABW14115.1
PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_4246 alpha/beta hydrolase fold.
 
  
 0.730
ABW14114.1
PFAM: monooxygenase FAD-binding; KEGG: msm:MSMEG_4866 3-(3-hydroxy-phenyl)propionate hydroxylase.
  
 
 0.686
ABW12315.1
PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_4414 alpha/beta hydrolase fold.
 
  
 0.658
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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