STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW14176.1PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV2275 transmembrane efflux protein. (555 aa)    
Predicted Functional Partners:
ABW16193.1
KEGG: fal:FRAAL2360 putative transmembrane efflux protein.
  
     0.774
ABW14054.1
PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00071 multidrug resistance transporter, MFS superfamily.
  
   
 0.732
ABW09589.1
Hypothetical protein; KEGG: sco:SCO5810 transmembrane efflux protein.
  
   
 0.680
ABW14175.1
PFAM: aldo/keto reductase; KEGG: fal:FRAAL3972 putative aldo/keto oxidoreductase, NAD(P)-dependent, related to aryl-alcohol dehydrogenases.
    
  0.501
ABW14174.1
Hypothetical protein; KEGG: cmi:CMM_0545 probable potassium uptake system NAD-binding protein.
  
    0.472
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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