STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW15991.1KEGG: fal:FRAAL0510 hypothetical protein; putative membrane protein. (370 aa)    
Predicted Functional Partners:
ABW14657.1
PFAM: polysaccharide biosynthesis protein; KEGG: fal:FRAAL1871 hypothetical protein; putative membrane protein.
 
  
 0.835
ABW15234.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: fal:FRAAL1240 hypothetical protein; putative peptidase domain.
 
  
 0.770
ABW15992.1
KEGG: fal:FRAAL0509 putative glycosyl transferase.
 
   
 0.765
ABW15339.1
KEGG: fal:FRAAL1143 hypothetical protein.
 
   
 0.756
ABW16556.1
KEGG: fal:FRAAL0096 hypothetical protein; putative IMP dehydrogenase / GMP reductase domain.
  
     0.756
ABW14256.1
KEGG: fal:FRAAL2859 hypothetical protein; putative coiled-coil domain.
  
     0.750
ABW09576.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: fal:FRAAL6784 hypothetical protein.
  
     0.742
ABW16612.1
KEGG: fal:FRAAL0040 hypothetical protein.
 
    0.741
ABW09702.1
KEGG: fal:FRAAL6637 hypothetical protein.
  
     0.740
ABW10516.1
KEGG: fal:FRAAL5892 hypothetical protein.
  
     0.737
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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