STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW16126.1Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL3904 hypothetical protein. (585 aa)    
Predicted Functional Partners:
ABW09778.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: fal:FRAAL6574 anti-sigma-B factor antagonist (anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.867
ABW11311.1
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4755 putative membrane phosphatase.
  
     0.772
ABW14835.1
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4783 putative integral membrane serine phosphatase.
  
     0.772
ABW14752.1
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4021 putative sigma factor PP2C-like phosphatases.
  
     0.760
ABW15522.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: fal:FRAAL0934 putative anti anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.675
ABW10123.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: fal:FRAAL6416 hypothetical protein.
 
 
 0.663
ABW14975.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fal:FRAAL1533 conserved hypothetical protein; putative ATP binding domain.
 
 
 0.641
ABW14673.1
Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL1846 hypothetical conserved protein; putative protein phosphatase.
 
 
0.611
ABW10779.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fal:FRAAL6353 putative regulator.
 
 
 0.568
ABW10430.1
RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma-70; RNA polymerase sigma-B/F/G type; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: fal:FRAAL5992 SigH putative RNA polymerase sigma factor.
 
 
 0.562
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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