STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP78889.1TIGRFAM: superoxide dismutase, Ni; KEGG: ace:Acel_0566 superoxide dismutase; PFAM: Superoxide dismutase Ni-type. (132 aa)    
Predicted Functional Partners:
ADP78890.1
PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: putative phage repressor.
 
   
 0.912
ADP78888.1
PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL5990 acetyltransferase.
       0.615
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.574
ADP80080.1
Catalase; KEGG: fal:FRAAL3167 catalase; PFAM: Catalase related subgroup; Catalase domain protein.
     
 0.548
ADP84467.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
     
 0.548
ADP80927.1
KEGG: nca:Noca_1563 glycosyl transferase, group 1.
  
     0.463
ADP78818.1
PFAM: Protein of unknown function DUF2800; KEGG: fal:FRAAL6067 hypothetical protein.
  
     0.462
ADP80394.1
KEGG: fal:FRAAL2177 hypothetical protein.
  
     0.460
ADP80636.1
KEGG: cai:Caci_6528 ABC transporter related; PFAM: ABC transporter related; X-Pro dipeptidyl-peptidase domain protein; SMART: AAA ATPase.
  
     0.441
ADP84312.1
PFAM: ferric-uptake regulator; KEGG: Fur family ferric uptake regulator; Belongs to the Fur family.
 
   
 0.430
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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