STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP80300.1PFAM: inositol monophosphatase; KEGG: fal:FRAAL2074 inositol-1-monophosphatase (IMPase) (inositol-1-phosphatase) (I-1-Pase). (286 aa)    
Predicted Functional Partners:
ADP85143.1
KEGG: fal:FRAAL6860 putative 1L-myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein.
  
 
 0.957
ADP78656.1
PFAM: phosphoesterase; KEGG: cai:Caci_7483 phosphoesterase.
     
  0.900
ADP81059.1
TIGRFAM: phospholipase C, phosphocholine-specific; KEGG: cmi:CMM_0504 putative phospholipase C; PFAM: phosphoesterase; protein of unknown function DUF756.
     
  0.900
ADP81502.1
KEGG: cmi:CMM_0504 putative phospholipase C; PFAM: phosphoesterase; protein of unknown function DUF756; Twin-arginine translocation pathway, signal sequence, subgroup.
     
  0.900
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.679
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.664
ADP79747.1
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: fal:FRAAL5224 hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.657
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.643
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
  
 
 0.624
ADP84280.1
KEGG: fal:FRAAL1005 hypothetical protein.
  
 
 0.623
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.