STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP81087.1PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mab:MAB_0750 putative oxidoreductase. (305 aa)    
Predicted Functional Partners:
ADP81841.1
Benzoate transporter; KEGG: rer:RER_39890 BenE family transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein.
 
      0.533
ADP81086.1
SMART: helix-turn-helix domain protein; KEGG: rop:ROP_16340 putative MmyB family DNA-binding protein.
       0.513
ADP80932.1
KEGG: cai:Caci_4150 NmrA family protein.
 
 0.485
ADP79286.1
KEGG: fal:FRAAL1549 putative modular polyketide synthase; PFAM: Beta-ketoacyl synthase; 2-nitropropane dioxygenase NPD; Acyl transferase; KR domain protein.
  
 
 0.467
ADP79620.1
KEGG: cai:Caci_3473 erythronolide synthase; PFAM: Beta-ketoacyl synthase; 2-nitropropane dioxygenase NPD; Acyl transferase; KR domain protein.
  
 
 0.467
ADP81488.1
KEGG: fal:FRAAL3620 hypothetical protein.
 
 
 0.463
ADP81110.1
PFAM: Beta-ketoacyl synthase; Erythronolide synthase docking; Acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: sma:SAV_418 modular polyketide synthase.
  
 
 0.460
ADP82244.1
PFAM: Acyl transferase; Beta-ketoacyl synthase; Erythronolide synthase docking; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: scb:SCAB_83911 putative type I polyketide synthase.
  
 
 0.460
ADP82319.1
KEGG: NmrA family protein.
 
 
 0.457
ADP81114.1
PFAM: Acyl transferase; Beta-ketoacyl synthase; phosphopantetheine-binding; Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL0349 putative 6-methylsalicylic acid synthase.
  
 
0.455
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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