STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP82056.1KEGG: afw:Anae109_1653 putative alkylated DNA repair protein. (220 aa)    
Predicted Functional Partners:
ADP82055.1
PFAM: regulatory protein TetR; KEGG: fal:FRAAL1635 TetR family transcriptional regulator.
       0.651
ADP82054.1
KEGG: pap:PSPA7_1456 hypothetical protein.
       0.505
ADP82053.1
Transcriptional regulator, AraC family; Manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sco:SCO4206 AraC family transcription regulator; SMART: Helix-turn-helix, AraC domain.
     
 0.491
ADP80626.1
KEGG: bpy:Bphyt_5159 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein.
   
    0.465
ADP82812.1
TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: cai:Caci_0833 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein.
   
    0.465
ADP85001.1
PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bcv:Bcav_4029 2-dehydropantoate 2-reductase.
   
    0.465
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.