STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_2286Bacterial regulatory s, gntR family protein. (243 aa)    
Predicted Functional Partners:
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
    
  0.734
DA2_1378
Bacterial regulatory s, gntR family protein.
  
  
 0.622
DA2_2788
Helix-turn-helix family protein.
 
    0.615
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.571
DA2_0149
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein.
    
  0.542
DA2_3464
pfkB carbohydrate kinase family protein.
 
  
 0.531
DA2_0953
Hypothetical protein.
  
    0.516
DA2_1427
Cupin domain protein.
  
    0.516
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 0.501
DA2_2397
Hypothetical protein.
  
  
 0.436
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.