STRINGSTRING
RPS1 protein (Hypocrea virens) - STRING interaction network
"RPS1" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS1Hypothetical protein (256 aa)    
Predicted Functional Partners:
EHK22484
Hypothetical protein (259 aa)
   
  0.999
EHK15742
Hypothetical protein (151 aa)
   
  0.998
RPS0
Hypothetical protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (291 aa)
   
  0.998
EHK22520
Hypothetical protein (191 aa)
     
  0.998
EHK16761
Hypothetical protein (239 aa)
   
  0.998
EHK15347
Hypothetical protein (201 aa)
     
  0.998
EHK25037
Hypothetical protein (2922 aa)
     
  0.998
EHK17592
Hypothetical protein (149 aa)
     
  0.998
EHK16846
Hypothetical protein (152 aa)
     
  0.998
EHK25200
Hypothetical protein (161 aa)
     
  0.998
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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