STRINGSTRING
EHK15443 protein (Hypocrea virens) - STRING interaction network
"EHK15443" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK15443Hypothetical protein (305 aa)    
Predicted Functional Partners:
EHK17623
Hypothetical protein (1062 aa)
     
 
  0.943
TIF6
Hypothetical protein; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export (246 aa)
   
 
  0.938
EHK20259
Hypothetical protein (128 aa)
       
      0.909
EHK24429
Hypothetical protein (391 aa)
       
      0.901
EHK16014
Hypothetical protein (332 aa)
       
      0.607
EHK22460
Hypothetical protein (159 aa)
     
      0.573
EHK15645
Hypothetical protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (314 aa)
       
 
  0.564
EHK25402
Hypothetical protein (983 aa)
     
 
  0.559
EHK22331
Hypothetical protein (755 aa)
     
 
  0.559
EHK20383
Hypothetical protein (844 aa)
     
 
  0.559
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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