STRINGSTRING
EHK15578 protein (Hypocrea virens) - STRING interaction network
"EHK15578" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK15578Hypothetical protein (350 aa)    
Predicted Functional Partners:
EHK20317
Hypothetical protein (1861 aa)
     
 
  0.969
EHK15638
Hypothetical protein (845 aa)
     
      0.776
EHK19207
Hypothetical protein (315 aa)
       
      0.770
EHK23444
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (395 aa)
     
 
  0.715
EHK22123
Hypothetical protein (533 aa)
     
 
  0.688
EHK24019
Hypothetical protein (548 aa)
     
 
  0.618
EHK27436
Hypothetical protein (385 aa)
     
 
  0.591
EHK20498
Hypothetical protein (450 aa)
     
 
  0.591
EHK24921
Hypothetical protein (824 aa)
       
 
  0.579
EHK15489
Hypothetical protein (314 aa)
     
 
  0.403
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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