STRINGSTRING
LKH1 protein (Hypocrea virens) - STRING interaction network
"LKH1" - Serine threonine protein kinase CMGC group in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LKH1Serine threonine protein kinase CMGC group (605 aa)    
Predicted Functional Partners:
DSK1
Serine/threonine protein kinase, CMGC group (585 aa)
     
 
0.545
EHK25422
Hypothetical protein (595 aa)
     
      0.542
SKN7
Two-component response regulator receiver (590 aa)
     
      0.487
EHK19632
Hypothetical protein (373 aa)
     
 
0.448
EHK24113
Hypothetical protein (396 aa)
     
 
0.442
EHK16493
Hypothetical protein (420 aa)
     
 
0.439
DSK2
Serine threonine protein kinase, CMGC group (408 aa)
     
 
0.433
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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