STRINGSTRING
EHK15699 protein (Hypocrea virens) - STRING interaction network
"EHK15699" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK15699Hypothetical protein (205 aa)    
Predicted Functional Partners:
EHK15737
Hypothetical protein (311 aa)
     
  0.978
EHK20298
Hypothetical protein (175 aa)
     
  0.974
EHK17803
Hypothetical protein (281 aa)
     
  0.974
EHK20259
Hypothetical protein (128 aa)
     
  0.855
EHK23230
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
     
  0.754
EHK23231
Hypothetical protein (135 aa)
     
  0.749
EHK16165
Hypothetical protein (142 aa)
     
  0.749
EHK27218
Hypothetical protein (430 aa)
       
  0.698
EHK16675
Hypothetical protein (481 aa)
       
  0.677
EHK19072
Hypothetical protein (671 aa)
     
  0.659
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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