STRINGSTRING
EHK15744 protein (Hypocrea virens) - STRING interaction network
"EHK15744" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK15744Hypothetical protein (396 aa)    
Predicted Functional Partners:
EHK22525
DNA lyase (630 aa)
     
  0.811
EHK26771
Hypothetical protein (146 aa)
       
  0.554
EHK25381
Hypothetical protein (143 aa)
       
  0.554
EHK23444
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (395 aa)
   
 
  0.547
EHK17555
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
       
 
  0.536
EHK15880
Hypothetical protein (467 aa)
       
 
  0.524
EHK22628
Hypothetical protein (654 aa)
       
 
  0.515
EHK26220
Hypothetical protein (249 aa)
       
 
  0.509
EHK19322
Hypothetical protein; Component of the post-replicative DNA mismatch repair system (MMR) (1208 aa)
     
 
  0.509
EHK23308
Hypothetical protein; Component of the post-replicative DNA mismatch repair system (MMR) (925 aa)
   
 
  0.499
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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