STRINGSTRING
EHK15909 protein (Hypocrea virens) - STRING interaction network
"EHK15909" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK15909Hypothetical protein (652 aa)    
Predicted Functional Partners:
EHK27410
Hypothetical protein (882 aa)
     
      0.896
YTM1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (474 aa)
     
   
  0.876
EHK25300
Hypothetical protein (700 aa)
     
   
0.836
EHK15752
Hypothetical protein (962 aa)
     
        0.822
EHK20584
Hypothetical protein (616 aa)
     
 
0.816
EHK18349
Hypothetical protein (555 aa)
     
   
  0.815
SPB1
Hypothetical protein; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (823 aa)
     
   
  0.803
EHK15766
Hypothetical protein (553 aa)
     
   
  0.791
EHK15538
Hypothetical protein (593 aa)
     
 
  0.788
EHK27205
Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (658 aa)
     
        0.771
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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