STRINGSTRING
EHK16008 protein (Hypocrea virens) - STRING interaction network
"EHK16008" - Secretion-related small GTPase in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK16008Secretion-related small GTPase (255 aa)    
Predicted Functional Partners:
EHK26366
Hypothetical protein (2144 aa)
     
  0.933
EHK17199
Hypothetical protein (183 aa)
   
      0.854
EHK15837
Secretion-related small GTPase (203 aa)
   
0.785
EHK20259
Hypothetical protein (128 aa)
       
  0.785
EHK21148
Hypothetical protein (692 aa)
       
  0.778
EHK20268
Glycosyltransferase family 2 protein (1858 aa)
       
  0.739
ypt1
Secretion-related small GTPase YPT1 (202 aa)
   
0.713
EHK17963
Hypothetical protein (200 aa)
     
  0.708
EHK17031
Hypothetical protein (983 aa)
       
  0.690
EHK24659
Hypothetical protein (818 aa)
       
  0.682
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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