STRINGSTRING
EHK16385 protein (Hypocrea virens) - STRING interaction network
"EHK16385" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK16385Hypothetical protein (429 aa)    
Predicted Functional Partners:
EHK22525
DNA lyase (630 aa)
     
  0.877
EHK26220
Hypothetical protein (249 aa)
   
 
  0.586
EHK22518
Hypothetical protein (1564 aa)
     
 
  0.565
EHK17749
Hypothetical protein; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1569 aa)
         
  0.553
EHK18522
Hypothetical protein (465 aa)
     
 
  0.539
EHK16109
Hypothetical protein (384 aa)
     
 
  0.521
EHK25498
Hypothetical protein (410 aa)
       
 
  0.513
EHK26290
Hypothetical protein (507 aa)
       
 
  0.485
EHK25242
Hypothetical protein; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (368 aa)
   
 
  0.472
EHK18352
Hypothetical protein (1386 aa)
     
 
  0.466
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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