STRINGSTRING
EHK16476 protein (Hypocrea virens) - STRING interaction network
"EHK16476" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK16476Hypothetical protein (807 aa)    
Predicted Functional Partners:
EHK19662
Hypothetical protein (704 aa)
       
  0.968
rho1
Ras small GTPase Rho1 (195 aa)
       
  0.804
EHK15414
Hypothetical protein (784 aa)
       
      0.799
EHK22570
Rac1 small GTPase (204 aa)
     
  0.786
cdc42
GTPase Cdc42 (194 aa)
     
  0.786
EHK26595
Hypothetical protein (187 aa)
       
  0.768
EHK25065
Ras-related GTPase, Rho2 subfamily (200 aa)
       
  0.768
EHK24393
Hypothetical protein (269 aa)
       
  0.768
EHK23323
Hypothetical protein (187 aa)
       
  0.768
rho3
Small GTPase Rho3 (207 aa)
       
  0.768
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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