STRINGSTRING
EHK16502 protein (Hypocrea virens) - STRING interaction network
"EHK16502" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK16502Hypothetical protein (1412 aa)    
Predicted Functional Partners:
EHK19296
Hypothetical protein (999 aa)
     
  0.986
EHK22817
Hypothetical protein (425 aa)
     
 
  0.960
EHK27429
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (121 aa)
       
  0.884
EHK19049
Hypothetical protein (866 aa)
     
 
  0.867
EHK25231
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1757 aa)
     
 
  0.804
EHK21483
Hypothetical protein (1887 aa)
     
 
  0.751
EHK25250
Hypothetical protein (304 aa)
       
 
  0.716
EHK16775
Hypothetical protein (1432 aa)
   
 
  0.713
EHK24670
Hypothetical protein (1201 aa)
     
  0.670
EHK17709
Hypothetical protein (570 aa)
     
  0.639
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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