STRINGSTRING
CK1a protein (Hypocrea virens) - STRING interaction network
"CK1a" - Casein kinase I in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK1aCasein kinase I (370 aa)    
Predicted Functional Partners:
EHK24877
Hypothetical protein (485 aa)
       
  0.963
EHK18550
Hypothetical protein (934 aa)
       
  0.933
EHK15363
Hypothetical protein (666 aa)
       
  0.933
EHK17011
Hypothetical protein (2760 aa)
     
 
  0.926
EHK22190
Hypothetical protein (420 aa)
       
  0.926
EHK18348
Hypothetical protein (812 aa)
     
  0.920
EHK18175
Hypothetical protein (1161 aa)
     
      0.903
EHK24847
Hypothetical protein (1658 aa)
       
      0.873
EHK27512
Hypothetical protein (394 aa)
   
  0.824
CDK1
Hypothetical protein (335 aa)
   
  0.823
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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