STRINGSTRING
EHK16947 protein (Hypocrea virens) - STRING interaction network
"EHK16947" - Signal recognition particle receptor alpha subunit, Srp101 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK16947Signal recognition particle receptor alpha subunit, Srp101 (654 aa)    
Predicted Functional Partners:
EHK20084
Hypothetical protein (517 aa)
   
0.968
EHK26573
Hypothetical protein (301 aa)
   
    0.939
EHK21147
Hypothetical protein (287 aa)
   
  0.935
EHK15645
Hypothetical protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (314 aa)
   
    0.923
EHK15136
Hypothetical protein (165 aa)
   
  0.915
EHK27204
Hypothetical protein (173 aa)
   
 
  0.911
EHK15559
Hypothetical protein (248 aa)
   
    0.909
EHK22652
Hypothetical protein (157 aa)
   
  0.905
EHK17735
Hypothetical protein (152 aa)
     
  0.886
EHK27406
Hypothetical protein (654 aa)
       
 
  0.833
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
Server load: low (10%) [HD]