STRINGSTRING
EHK17032 protein (Hypocrea virens) - STRING interaction network
"EHK17032" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK17032Hypothetical protein (80 aa)    
Predicted Functional Partners:
EHK19003
Hypothetical protein (139 aa)
       
  0.971
EHK23834
Hypothetical protein (253 aa)
     
 
  0.941
EHK24585
Hypothetical protein (1732 aa)
       
 
  0.766
EHK25563
Hypothetical protein (1014 aa)
       
 
  0.754
EHK17662
Hypothetical protein (1133 aa)
       
 
  0.754
EHK26445
Hypothetical protein (276 aa)
       
 
  0.513
EHK24674
Hypothetical protein (764 aa)
       
  0.480
EHK21020
Hypothetical protein (639 aa)
       
  0.480
EHK23230
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
       
 
  0.426
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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