STRINGSTRING
EHK18219 protein (Hypocrea virens) - STRING interaction network
"EHK18219" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK18219Hypothetical protein (1453 aa)    
Predicted Functional Partners:
EHK27137
Hypothetical protein (600 aa)
     
  0.976
EHK26625
Hypothetical protein (852 aa)
     
 
  0.948
EHK23444
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (395 aa)
   
  0.943
EHK22297
Hypothetical protein (276 aa)
     
  0.921
EHK27325
Hypothetical protein (1105 aa)
     
  0.893
EHK23538
Hypothetical protein (731 aa)
   
  0.889
EHK24417
Hypothetical protein (1045 aa)
     
  0.883
EHK26290
Hypothetical protein (507 aa)
     
  0.851
EHK16209
Hypothetical protein (550 aa)
   
  0.814
EHK21270
Hypothetical protein (1471 aa)
     
  0.810
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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