STRINGSTRING
rho1 protein (Hypocrea virens) - STRING interaction network
"rho1" - Ras small GTPase Rho1 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rho1Ras small GTPase Rho1 (195 aa)    
Predicted Functional Partners:
EHK22182
Hypothetical protein (1080 aa)
       
  0.982
PKC2
Protein kinase C (1134 aa)
       
  0.980
EHK16920
Hypothetical protein (1245 aa)
       
  0.978
EHK17963
Hypothetical protein (200 aa)
     
  0.974
EHK26417
Hypothetical protein (1142 aa)
       
  0.974
EHK25040
Hypothetical protein (1346 aa)
       
  0.944
EHK26366
Hypothetical protein (2144 aa)
     
  0.933
EHK18791
Hypothetical protein (791 aa)
       
  0.901
tmk2
Mitogen activated protein kinase tmk2 (413 aa)
       
  0.878
EHK26069
Hypothetical protein (1653 aa)
       
  0.876
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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