STRINGSTRING
EHK18900 protein (Hypocrea virens) - STRING interaction network
"EHK18900" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK18900Hypothetical protein (345 aa)    
Predicted Functional Partners:
EHK25642
Hypothetical protein (242 aa)
     
      0.844
EHK27300
Hypothetical protein (487 aa)
   
      0.835
EHK27273
Hypothetical protein (487 aa)
   
      0.667
EHK15122
Hypothetical protein (392 aa)
     
        0.614
EHK23263
Hypothetical protein (209 aa)
     
      0.582
EHK27205
Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (658 aa)
     
   
  0.535
EHK24754
Hypothetical protein (1337 aa)
     
        0.510
EHK15559
Hypothetical protein (248 aa)
     
        0.506
EHK19445
Hypothetical protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (185 aa)
     
        0.493
EHK26453
Hypothetical protein (317 aa)
     
      0.491
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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