STRINGSTRING
EHK19452 protein (Hypocrea virens) - STRING interaction network
"EHK19452" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK19452Hypothetical protein (351 aa)    
Predicted Functional Partners:
EHK25459
Hypothetical protein (376 aa)
     
  0.992
CDK7
Hypothetical protein (421 aa)
     
  0.991
EHK17796
Hypothetical protein (763 aa)
     
  0.988
EHK23872
Hypothetical protein; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (298 aa)
       
  0.961
EHK15152
Hypothetical protein (422 aa)
     
  0.932
EHK19296
Hypothetical protein (999 aa)
     
  0.918
EHK26614
Hypothetical protein (363 aa)
     
  0.917
CDK8
Hypothetical protein (469 aa)
     
  0.886
CDK1
Hypothetical protein (335 aa)
       
  0.883
CCK1
Serine threonine protein kinase CMGC group (322 aa)
     
  0.872
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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