STRINGSTRING
EHK20007 protein (Hypocrea virens) - STRING interaction network
"EHK20007" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK20007Hypothetical protein (1675 aa)    
Predicted Functional Partners:
EHK20317
Hypothetical protein (1861 aa)
       
      0.902
EHK20355
Hypothetical protein (551 aa)
     
  0.800
EHK16031
Hypothetical protein (1380 aa)
     
0.785
EHK17790
Hypothetical protein (136 aa)
       
  0.781
EHK27000
Hypothetical protein (89 aa)
       
  0.773
EHK18580
Hypothetical protein (154 aa)
       
  0.773
EHK16360
Hypothetical protein (135 aa)
       
  0.773
EHK27489
Hypothetical protein (1221 aa)
     
  0.749
EHK22249
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (83 aa)
       
  0.712
EHK17789
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.712
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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