STRINGSTRING
EHK20016 protein (Hypocrea virens) - STRING interaction network
"EHK20016" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK20016Hypothetical protein (260 aa)    
Predicted Functional Partners:
EHK20260
Hypothetical protein (282 aa)
     
 
  0.911
EHK16946
Hypothetical protein (320 aa)
     
 
  0.748
EHK26710
Hypothetical protein (297 aa)
       
 
  0.681
ypt1
Secretion-related small GTPase YPT1 (202 aa)
     
 
  0.668
EHK23628
Hypothetical protein (523 aa)
 
            0.664
EHK18677
Secretion-related small GTPase (212 aa)
       
  0.635
EHK26085
Ras-related small GTPase (206 aa)
       
 
  0.536
EHK17793
Hypothetical protein (110 aa)
       
      0.526
EHK25193
Secretion-related small GTPase (220 aa)
       
  0.487
EHK17029
Secretion-related small GTPase (229 aa)
       
  0.487
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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