STRINGSTRING
EHK20257 protein (Hypocrea virens) - STRING interaction network
"EHK20257" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK20257Hypothetical protein (160 aa)    
Predicted Functional Partners:
EHK24390
Hypothetical protein (353 aa)
     
  0.975
EHK15888
Hypothetical protein (203 aa)
     
   
  0.906
EHK25995
Hypothetical protein (75 aa)
     
        0.893
LIA1
Hypothetical protein; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (321 aa)
     
  0.818
EHK19161
Hypothetical protein (262 aa)
     
 
  0.767
EHK15898
Hypothetical protein (436 aa)
     
 
  0.766
EHK19022
Hypothetical protein (144 aa)
   
   
  0.753
EHK17156
Hypothetical protein (111 aa)
     
 
  0.748
EHK22521
Hypothetical protein (160 aa)
   
   
  0.747
EHK27264
Hypothetical protein (358 aa)
     
   
  0.743
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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